9A8Y | pdb_00009a8y

NMR-based structure of SARS-CoV-2 ORF6 accessory protein in liposomes

PDB DOI: https://doi.org/10.2210/pdb9A8Y/pdb

Organism(s): Severe acute respiratory syndrome coronavirus 2
Mutation(s): No

Deposited: 2024-10-25 Released: 2025-05-21
Deposition Author(s): Ninot-Pedrosa, M., Palfy, G., Meier, B.H., Bockmann, A., Lecoq, L.

Integrative Structure Snapshot

Multi-Scale: No
Multi-State: No
Ordered State: No
Deposited Models: 10
Representative Model: 2

wwPDB ValidationFull ReportSummary Report

This is version 1.0 of the entry. See complete history.

Literature

NMR Structural Characterization of SARS-CoV-2 ORF6 Reveals an N-Terminal Membrane Anchor

Ninot-Pedrosa, M., Palfy, G., Razmazma, H., Crowley, J., Fogeron, M.-L., Bersch, B., Barnes, A., Brutscher, B., Monticelli, L., Bockmann, A., Meier, B.H., Lecoq, L.

(2025) J Am Chem Soc

DOI: https://doi.org/10.1021/jacs.4c17030

Macromolecule Content

Total Structure Weight: 7.33 kDa
Atom Count: 511
Modeled Residue Count: 61
Deposited Residue Count: 61
Unique protein chains: 1

Macromolecules

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(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
SARS-CoV-2 ORF6 accessory protein	A	61	Severe acute respiratory syndrome coronavirus 2	Mutation(s): 0
UniProt
Find proteins for P0DTC6 (Severe acute respiratory syndrome coronavirus 2) Explore P0DTC6 Go to UniProtKB: P0DTC6
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	P0DTC6
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Integrative Structure Snapshot

Multi-Scale: No
Multi-State: No
Ordered State: No
Deposited Models: 10
Representative Model: 2

Structure Validation

View Full Validation Report

View Summary Validation Report

Entry History

Deposition Data

Released Date: 2025-05-21

Deposition Author(s):

Ninot-Pedrosa, M.

Revision History (Full details and data files)

Version 1.0: 2025-05-21
Type: Initial release

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.