| IPR007252 | Nuclear pore protein 84/107 | Family |
| IPR039462 | Nucleoporin Nup159/Nup146, N-terminal | Domain |
| IPR015943 | WD40/YVTN repeat-like-containing domain superfamily | Homologous Superfamily |
AW, AX, BE, BF, BM, BN, BP, BT, BX, CB, CF, CJ, CN, CR, CV, CZ, DD, DH | IPR007758 | Nucleoporin, NSP1-like, C-terminal | Domain |
AW, AX, BE, BF, BM, BN, BP, BT, BX, CB, CF, CJ, CN, CR, CV, CZ, DD, DH | IPR026010 | Nucleoporin NSP1/NUP62 | Family |
BO, BS, BW, CA, CE, CI, CM, CQ, CU, CY, DC, DG | IPR007231 | Nucleoporin interacting component Nup93/Nic96 | Family |
BQ, BU, BY, CC, CG, CK, CO, CS, CW, DA, DE, DI | IPR024882 | Nucleoporin p58/p45/NUP49 | Family |
BQ, BU, BY, CC, CG, CK, CO, CS, CW, DA, DE, DI | IPR025574 | Nucleoporin FG repeat | Repeat |
BR, BV, BZ, CD, CH, CL, CP, CT, CX, DB, DF, DJ | IPR025574 | Nucleoporin FG repeat | Repeat |
BR, BV, BZ, CD, CH, CL, CP, CT, CX, DB, DF, DJ | IPR024864 | Nucleoporin Nup54/Nup57/Nup44 | Family |
BR, BV, BZ, CD, CH, CL, CP, CT, CX, DB, DF, DJ | IPR025712 | Nucleoporin Nup54, alpha-helical domain | Domain |
| IPR042537 | Nucleoporin, Nup155-like, C-terminal, subdomain 2 | Homologous Superfamily |
| IPR042533 | Nucleoporin, Nup155-like, C-terminal, subdomain 1 | Homologous Superfamily |
| IPR014908 | Nucleoporin, Nup133/Nup155-like, N-terminal | Domain |
| IPR004870 | Nucleoporin, Nup155-like | Family |
| IPR007187 | Nucleoporin, Nup133/Nup155-like, C-terminal | Domain |
| IPR042537 | Nucleoporin, Nup155-like, C-terminal, subdomain 2 | Homologous Superfamily |
| IPR042533 | Nucleoporin, Nup155-like, C-terminal, subdomain 1 | Homologous Superfamily |
| IPR014908 | Nucleoporin, Nup133/Nup155-like, N-terminal | Domain |
| IPR004870 | Nucleoporin, Nup155-like | Family |
| IPR007187 | Nucleoporin, Nup133/Nup155-like, C-terminal | Domain |
| IPR044840 | Nucleoporin Nup188 | Family |
| IPR041634 | Nuclear pore protein Nup188, C-terminal | Domain |
| IPR048883 | Nucleoporin Nup188, N-terminal subdomain III | Domain |
| IPR018864 | Nucleoporin Nup188, N-terminal | Domain |
| IPR021827 | Nucleoporin Nup186/Nup192/Nup205 | Family |
| IPR007846 | RNA-recognition motif (RRM) Nup35-type domain | Domain |
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily | Homologous Superfamily |
| IPR035979 | RNA-binding domain superfamily | Homologous Superfamily |
| IPR011502 | Nucleoporin Nup85-like | Family |
| IPR007846 | RNA-recognition motif (RRM) Nup35-type domain | Domain |
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily | Homologous Superfamily |
| IPR035979 | RNA-binding domain superfamily | Homologous Superfamily |
| IPR019049 | Nucleoporin protein Ndc1-Nup | Family |
| IPR012578 | Nuclear pore complex component | Family |
| IPR056544 | Nucleoporin POM152, immunoglobulin-like domain | Domain |
| IPR056540 | Nucleoporin POM152, N-terminal transmembrane domain | Domain |
| IPR056542 | Nucleoporin POM152, first Ig-like domain | Domain |
| IPR056543 | Nucleoporin POM152, ninth Ig-like domain | Domain |
| IPR037701 | Nucleoporin Pom152 | Family |
| IPR056541 | Nucleoporin POM152, Ig-like domain | Domain |
| IPR025574 | Nucleoporin FG repeat | Repeat |
| IPR037665 | Nucleoporin peptidase S59-like | Family |
| IPR036903 | Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain superfamily | Homologous Superfamily |
| IPR007230 | Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain | Domain |
| IPR025574 | Nucleoporin FG repeat | Repeat |
| IPR037665 | Nucleoporin peptidase S59-like | Family |
| IPR036903 | Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain superfamily | Homologous Superfamily |
| IPR007230 | Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain | Domain |
| IPR012476 | mRNA export factor GLE1-like | Family |
| IPR038506 | GLE1-like superfamily | Homologous Superfamily |
| IPR025574 | Nucleoporin FG repeat | Repeat |
| IPR037665 | Nucleoporin peptidase S59-like | Family |
| IPR036903 | Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain superfamily | Homologous Superfamily |
| IPR007230 | Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain | Domain |
| IPR021967 | Nuclear pore complex protein NUP96, C-terminal domain | Domain |
| IPR021717 | Nucleoporin Nup120/160 | Family |
| IPR055090 | Nucleoporin NUP120, helical domain, saccharomycetes | Domain |
| IPR034432 | Nucleoporin nup60 | Family |
| IPR001611 | Leucine-rich repeat | Repeat |
| IPR012929 | Nucleoprotein TPR/MLP1 | Domain |
| IPR037624 | Nuclear pore complex protein Nup133-like | Family |
| IPR015943 | WD40/YVTN repeat-like-containing domain superfamily | Homologous Superfamily |
| IPR014908 | Nucleoporin, Nup133/Nup155-like, N-terminal | Domain |
| IPR025574 | Nucleoporin FG repeat | Repeat |
| IPR037665 | Nucleoporin peptidase S59-like | Family |
| IPR036903 | Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain superfamily | Homologous Superfamily |
| IPR007230 | Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain | Domain |
| IPR021967 | Nuclear pore complex protein NUP96, C-terminal domain | Domain |
| IPR036322 | WD40-repeat-containing domain superfamily | Homologous Superfamily |
| IPR037363 | Sec13/Seh1 family | Family |
| IPR001680 | WD40 repeat | Repeat |
| IPR015943 | WD40/YVTN repeat-like-containing domain superfamily | Homologous Superfamily |
| IPR015943 | WD40/YVTN repeat-like-containing domain superfamily | Homologous Superfamily |
| IPR036322 | WD40-repeat-containing domain superfamily | Homologous Superfamily |
| IPR037363 | Sec13/Seh1 family | Family |
| IPR001680 | WD40 repeat | Repeat |
| IPR037177 | Dynein light chain superfamily | Homologous Superfamily |
| IPR001372 | Dynein light chain, type 1/2 | Family |
| IPR019763 | Dynein light chain, type 1/2, conserved site | Conserved Site |
| IPR037700 | Nucleoporin NUP88/NUP82 | Family |