Download MendeleyCryoEM structure of BchN-BchB electron acceptor component protein of DPOR
Kashyap, R., Antony, E.To be published.
8VQH | pdb_00008vqh
CryoEM structure of BchN-BchB electron acceptor component protein of DPOR
- PDB DOI: https://doi.org/10.2210/pdb8VQH/pdb
- EM Map EMD-43443: EMDB EMDataResource
- Classification: OXIDOREDUCTASE
- Organism(s): Cereibacter sphaeroides
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2024-01-18 Released: 2025-04-30
- Funding Organization(s): Department of Energy (DOE, United States)
Experimental Data Snapshot
- Method: ELECTRON MICROSCOPY
- Resolution: 2.70 Å
- Aggregation State: PARTICLE
- Reconstruction Method: SINGLE PARTICLE
wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Light-independent protochlorophyllide reductase subunit N | 428 | Cereibacter sphaeroides | Mutation(s): 0 Gene Names: bchN, RSKD131_1611 EC: 1.3.7.7 |  | |
UniProt | |||||
Find proteins for B9KK24 (Cereibacter sphaeroides (strain KD131 / KCTC 12085)) Explore B9KK24 Go to UniProtKB: B9KK24 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | B9KK24 | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Light-independent protochlorophyllide reductase subunit B | 630 | Cereibacter sphaeroides | Mutation(s): 0 Gene Names: SMT3, YDR510W, D9719.15, bchB, RHOS4_18910, RSP_0286 EC: 1.3.7.7 |  | |
UniProt | |||||
Find proteins for Q12306 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c)) Explore Q12306 Go to UniProtKB: Q12306 | |||||
Find proteins for Q9Z5D9 (Cereibacter sphaeroides (strain ATCC 17023 / DSM 158 / JCM 6121 / CCUG 31486 / LMG 2827 / NBRC 12203 / NCIMB 8253 / ATH 2.4.1.)) Explore Q9Z5D9 Go to UniProtKB: Q9Z5D9 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Groups | Q12306Q9Z5D9 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| SF4 (Subject of Investigation/LOI) Query on SF4 | E [auth A], F [auth C] | IRON/SULFUR CLUSTER Fe4 S4 LJBDFODJNLIPKO-UHFFFAOYSA-N |  | ||
| CU (Subject of Investigation/LOI) Query on CU | G [auth D], H [auth D] | COPPER (II) ION Cu JPVYNHNXODAKFH-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: ELECTRON MICROSCOPY
- Resolution: 2.70 Å
- Aggregation State: PARTICLE
- Reconstruction Method: SINGLE PARTICLE
Entry History & Funding Information
Deposition Data
- Released Date: 2025-04-30 Deposition Author(s): Kashyap, R., Antony, E.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Department of Energy (DOE, United States) | United States | DE-SC0020965 |
Revision History (Full details and data files)
- Version 1.0: 2025-04-30
Type: Initial release
